PathIntegrityTestCase

class PathIntegrityTestCase(methodName='runTest')

Bases: IntegrityTestCase

A test case that can be configured with paths.

For example, in this might be used in a custom instance of Biomappings like in the following:

from biomappings.testing import PathIntegrityTestCase

HERE = Path(__file__).parent.resolve()

class TestCustom(PathIntegrityTestCase):
    predictions_path = HERE.joinpath("predictions.tsv")
    positives_path = HERE.joinpath("positive.tsv")
    negatives_path = HERE.joinpath("negative.tsv")
    unsure_path = HERE.joinpath("unsure.tsv")

Create an instance of the class that will use the named test method when executed. Raises a ValueError if the instance does not have a method with the specified name.

Methods Summary

setUpClass()

Set up the test case.

Methods Documentation

classmethod setUpClass() → None

Set up the test case.